Fixed a harmless (but annoying) bug wherein the read name for the SAMRecords increases by two on every iteration rather than one.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@189 348d0f76-0448-11de-a6fe-93d51630548a
2009-03-25 15:20:29 +00:00 · 2009-03-25 15:20:29 +00:00 · 607731da91
parent 44acc358b7
commit 607731da91
1 changed files with 0 additions and 2 deletions
--- a/java/src/org/broadinstitute/sting/playground/fourbasecaller/FourBaseRecaller.java
+++ b/java/src/org/broadinstitute/sting/playground/fourbasecaller/FourBaseRecaller.java
@ -165,8 +165,6 @@ public class FourBaseRecaller {
            sr.setBaseQualities(bestqual);
            sr.setAttribute("SQ", nextbestqual);
            sfw.addAlignment(sr);
-
-            queryid++;
        }

        sfw.close();