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Minor ant-bridge.sh changes 

-add "gatk" target to mimic old "ant gatk" target
-comment out release targets to prevent accidental releases
This commit is contained in:
David Roazen 2014-02-03 12:54:20 -05:00
parent a4289711e2
commit 60567c8d7e
1 changed files with 9 additions and 6 deletions
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15
ant-bridge.sh
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@ -50,6 +50,9 @@ for arg in "${@}" ; do
elif [[ "${arg}" == "dist" ]] ; then
mvn_args="verify"
elif [[ "${arg}" == "gatk" ]] ; then
mvn_args="verify '-P!queue'"
elif [[ "${arg}" == "test.compile" ]] ; then
mvn_args="test-compile"
@ -69,13 +72,13 @@ for arg in "${@}" ; do
elif [[ "${arg}" == "package.queue.all" ]] ; then
mvn_args="package"
elif [[ "${arg}" == "release.gatk.full" ]] ; then
mvn_args="package '-P!private,!queue'"
post_script=" && private/src/main/scripts/shell/copy_release.sh public/gatk-package/target/GenomeAnalysisTK-*.tar.bz2"
# elif [[ "${arg}" == "release.gatk.full" ]] ; then
# mvn_args="package '-P!private,!queue'"
# post_script=" && private/src/main/scripts/shell/copy_release.sh public/gatk-package/target/GenomeAnalysisTK-*.tar.bz2"
elif [[ "${arg}" == "release.queue.full" ]] ; then
mvn_args="package '-P!private'"
post_script=" && private/src/main/scripts/shell/copy_release.sh public/queue-package/target/Queue-*.tar.bz2"
# elif [[ "${arg}" == "release.queue.full" ]] ; then
# mvn_args="package '-P!private'"
# post_script=" && private/src/main/scripts/shell/copy_release.sh public/queue-package/target/Queue-*.tar.bz2"
elif [[ "${arg}" == "build-picard-private" ]] ; then
mvn_args="mvn install -f private/picard-maven/pom.xml"