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the oldest java mistake in the book... 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1840 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
aaron 2009-10-14 19:32:13 +00:00
parent 52d2e0ca07
commit 60183229ab
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/utils/genotype/vcf/VCFParameters.java
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@ -65,7 +65,7 @@ class VCFParameters {
}
public void addAlternateBase(String base) {
if (!alternateBases.contains(String.valueOf(base)) && base != String.valueOf(this.getReferenceBase()))
if (!alternateBases.contains(String.valueOf(base)) && !base.equals(String.valueOf(this.getReferenceBase())))
alternateBases.add(base);
}