From 5d5c7f9d34f38d69dd4391ba80b03251cf897ffd Mon Sep 17 00:00:00 2001 From: weisburd Date: Fri, 30 Apr 2010 13:55:52 +0000 Subject: [PATCH] Changed short code of stop codon to 'stop' git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3272 348d0f76-0448-11de-a6fe-93d51630548a --- .../sting/playground/gatk/walkers/annotator/AminoAcidTable.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/annotator/AminoAcidTable.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/annotator/AminoAcidTable.java index ff04e8409..2af2b42bb 100755 --- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/annotator/AminoAcidTable.java +++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/annotator/AminoAcidTable.java @@ -16,7 +16,7 @@ public class AminoAcidTable { protected static final AminoAcid METHIONINE = new AminoAcid("M" , "Methionine", "Met"); protected static final AminoAcid CYSTEINE = new AminoAcid("C" , "Cysteine", "Cys"); protected static final AminoAcid ALANINE = new AminoAcid("A" , "Alanine", "Ala"); - protected static final AminoAcid STOP_CODON = new AminoAcid("*" , "Stop Codon", "Amb"); + protected static final AminoAcid STOP_CODON = new AminoAcid("*" , "Stop Codon", "Stop"); protected static final AminoAcid GLYCINE = new AminoAcid("G" , "Glycine", "Gly"); protected static final AminoAcid PROLINE = new AminoAcid("P" , "Proline", "Pro"); protected static final AminoAcid THEONINE = new AminoAcid("T" , "Threonine", "Thr");