From 5d0705acd654cfed6e9bf2ba690a0c75ee5a50d8 Mon Sep 17 00:00:00 2001 From: Ryan Poplin Date: Tue, 20 Sep 2011 09:07:28 -0400 Subject: [PATCH] Adding quality scores to the VCF records created by the Haplotype Caller --- .../sting/gatk/walkers/genotyper/UnifiedGenotyperEngine.java | 1 - 1 file changed, 1 deletion(-) diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperEngine.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperEngine.java index a5cb00a5d..87dd37bf6 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperEngine.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperEngine.java @@ -40,7 +40,6 @@ import org.broadinstitute.sting.utils.codecs.vcf.VCFConstants; import org.broadinstitute.sting.utils.exceptions.ReviewedStingException; import org.broadinstitute.sting.utils.pileup.PileupElement; import org.broadinstitute.sting.utils.pileup.ReadBackedExtendedEventPileup; -import org.broadinstitute.sting.utils.pileup.ReadBackedExtendedEventPileupImpl; import org.broadinstitute.sting.utils.pileup.ReadBackedPileup; import org.broadinstitute.sting.utils.variantcontext.*;