diff --git a/public/java/src/org/broadinstitute/sting/utils/help/GATKDoclet.java b/public/java/src/org/broadinstitute/sting/utils/help/GATKDoclet.java index d14d95e60..d4dd47a3a 100644 --- a/public/java/src/org/broadinstitute/sting/utils/help/GATKDoclet.java +++ b/public/java/src/org/broadinstitute/sting/utils/help/GATKDoclet.java @@ -45,18 +45,15 @@ import org.broadinstitute.sting.utils.text.XReadLines; import java.io.*; import java.lang.annotation.Annotation; -import java.net.HttpURLConnection; -import java.net.MalformedURLException; -import java.net.URL; import java.util.*; /** * Javadoc Doclet that combines javadoc, GATK ParsingEngine annotations, and FreeMarker * templates to produce html formatted GATKDocs for walkers * and other classes. - *
+ * * This document has the following workflow: - * + * * 1 -- walk the javadoc heirarchy, looking for class that have the * DocumentedGATKFeature annotation or are in the type heirarchy in the * static list of things to document, and are to be documented @@ -66,7 +63,7 @@ import java.util.*; * as well as links to related features via their units. Writing * of a specific class HTML is accomplished by a generate DocumentationHandler * 4 -- write out an index of all units, organized by group - * + * * The documented classes are restricted to only those with @DocumentedGATKFeature * annotation or are in the STATIC_DOCS class. */