From 59cef880d195937e2e2eee9344a7bcc0d2ff016b Mon Sep 17 00:00:00 2001
From: Ryan Poplin <rpoplin@broadinstitute.org>
Date: Mon, 26 Nov 2012 12:20:07 -0500
Subject: [PATCH] Updating HC integration tests because experimental,
 HC-specific annotations have been removed.

---
 .../walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/protected/java/test/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java b/protected/java/test/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java
index 007df3602..f8ba1f4cc 100644
--- a/protected/java/test/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java
+++ b/protected/java/test/org/broadinstitute/sting/gatk/walkers/haplotypecaller/HaplotypeCallerIntegrationTest.java
@@ -72,7 +72,7 @@ public class HaplotypeCallerIntegrationTest extends WalkerTest {
     @Test
     public void HCTestProblematicReadsModifiedInActiveRegions() {
         final String base = String.format("-T HaplotypeCaller -R %s -I %s", REF, privateTestDir + "haplotype-problem-4.bam") + " --no_cmdline_in_header -o %s -minPruning 3 -L 4:49139026-49139965";
-        final WalkerTestSpec spec = new WalkerTestSpec(base, Arrays.asList("788176e1717bd28fc7cbc8e3efbb6100"));
+        final WalkerTestSpec spec = new WalkerTestSpec(base, Arrays.asList("ec437d2d9f3ae07d155983be0155c8ed"));
         executeTest("HCTestProblematicReadsModifiedInActiveRegions: ", spec);
     }