From 593c8065d925ee3578b58fbf41d8a43d25dfaf09 Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Fri, 12 Oct 2012 08:35:45 -0400
Subject: [PATCH] Fix docs for BadMateFilter

---
 .../org/broadinstitute/sting/gatk/filters/BadMateFilter.java    | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/public/java/src/org/broadinstitute/sting/gatk/filters/BadMateFilter.java b/public/java/src/org/broadinstitute/sting/gatk/filters/BadMateFilter.java
index 8596e18eb..b3c84511a 100755
--- a/public/java/src/org/broadinstitute/sting/gatk/filters/BadMateFilter.java
+++ b/public/java/src/org/broadinstitute/sting/gatk/filters/BadMateFilter.java
@@ -27,7 +27,7 @@ package org.broadinstitute.sting.gatk.filters;
 import net.sf.samtools.SAMRecord;
 
 /**
- * Filter out reads with low mapping qualities.
+ * Filter out reads whose mate maps to a different contig.
  *
  * @author ebanks
  * @version 0.1