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Bug fix for ClipReadsWalker when stats output isn't provided 

-- See http://getsatisfaction.com/gsa/topics/clipreadswalker?utm_content=topic_link&utm_medium=email&utm_source=reply_notification
This commit is contained in:
Mark DePristo 2011-10-23 16:36:48 -04:00
parent d7367c152a
commit 585a45b7a3
1 changed files with 2 additions and 1 deletions
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3
public/java/src/org/broadinstitute/sting/gatk/walkers/ClipReadsWalker.java
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@ -475,7 +475,8 @@ public class ClipReadsWalker extends ReadWalker<ClipReadsWalker.ReadClipperWithD
}
public void onTraversalDone(ClippingData data) {
out.printf(data.toString());
if ( out != null )
out.printf(data.toString());
}
// --------------------------------------------------------------------------------------------------------------