From 57f254b13a483d6f9c7ccfc1e49b5a57f8cb3fbb Mon Sep 17 00:00:00 2001 From: rpoplin Date: Fri, 7 May 2010 13:58:25 +0000 Subject: [PATCH] VE integration test git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3324 348d0f76-0448-11de-a6fe-93d51630548a --- .../walkers/varianteval/VariantEvalIntegrationTest.java | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java index c1c2e211e..361f41e44 100755 --- a/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java +++ b/java/test/org/broadinstitute/sting/gatk/walkers/varianteval/VariantEvalIntegrationTest.java @@ -28,8 +28,8 @@ public class @Test public void testVESimple() { HashMap expectations = new HashMap(); - expectations.put("-L 1:1-10,000,000", "b2fcb4a3e852c43acb93f7720a3c4b76"); - expectations.put("-L 1:1-10,000,000 -family NA19238+NA19239=NA19240 -MVQ 0", "63e9b9db244f4a593e643d2d7431219e"); + expectations.put("-L 1:1-10,000,000", "08b93c2561742dc480534ae16d2d0508"); + expectations.put("-L 1:1-10,000,000 -family NA19238+NA19239=NA19240 -MVQ 0", "65bf329cf1499544d1eb28de786a4561"); for ( Map.Entry entry : expectations.entrySet() ) { String extraArgs = entry.getKey(); @@ -71,7 +71,7 @@ public class String extraArgs = "-L 1:1-10,000,000 -family NA19238+NA19239=NA19240 -MVQ 30"; WalkerTestSpec spec = new WalkerTestSpec( root + " " + extraArgs + " -o %s -outputVCF %s", 2, - Arrays.asList("f7a06a988573c5b1b69e52fb8e0edc06", "b4a42c90318adc88361691ece50426f2")); + Arrays.asList("521837758da151b84fca57fd1bb7dad1", "b4a42c90318adc88361691ece50426f2")); executeTest("testVEWriteVCF", spec); } }