From 569456850df61a2d69badc374a06c83062ff648d Mon Sep 17 00:00:00 2001
From: chartl <chartl@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Wed, 30 Jun 2010 17:05:53 +0000
Subject: [PATCH] Mark pointed out there's differentiation in the filter field.
 Rolling back.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3687 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../org/broadinstitute/sting/gatk/walkers/vcf/VCFCombine.java   | 2 --
 1 file changed, 2 deletions(-)

diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/vcf/VCFCombine.java b/java/src/org/broadinstitute/sting/gatk/walkers/vcf/VCFCombine.java
index 7db48b5fb..3d32ef27d 100755
--- a/java/src/org/broadinstitute/sting/gatk/walkers/vcf/VCFCombine.java
+++ b/java/src/org/broadinstitute/sting/gatk/walkers/vcf/VCFCombine.java
@@ -204,8 +204,6 @@ public class VCFCombine extends RodWalker<VCFRecord, VCFWriter> {
                         set = priority2 + "-filteredInOther";
                         call = vcf2;
                     }
-                } else {
-                    set = priority1 + "-filteredAndNoCall";
                 }
             } else { // good call
                 if ( vcf2 != null ) {