Optimized CoverageByRG and Added GCContent

Browse Source

- CoverageByRG now uses a hashmap for its value instead of a list. It runs about 4 times faster.
- Cleaned up some of the code
- CoverageByRG now calculates GCContent

Signed-off-by: Mauricio Carneiro <carneiro@broadinstitute.org>

...

This commit is contained in:

Roger Zurawicki 2011-12-28 11:29:18 -05:00 committed by Mauricio Carneiro

parent 0c05998c4c

commit 5672688a73

Show all changes Ignore whitespace when comparing lines Ignore changes in amount of whitespace Ignore changes in whitespace at EOL

Show Stats Download Patch File Download Diff File Expand all files Collapse all files

Diff Content Not Available