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VCFHeaderUnitTest needed to be updated to reflect that we are doing VCF4.1 not VCF4.0

This commit is contained in:
Mark DePristo 2012-06-06 14:06:13 -04:00
parent d74c46bbcb
commit 54817f8d16
1 changed files with 3 additions and 3 deletions
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6
public/java/test/org/broadinstitute/sting/utils/genotype/vcf/VCFHeaderUnitTest.java
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@ -33,13 +33,13 @@ public class VCFHeaderUnitTest extends BaseTest {
@Test @Test
public void testVCF4ToVCF4() { public void testVCF4ToVCF4() {
VCFHeader header = createHeader(VCF4headerStrings); VCFHeader header = createHeader(VCF4headerStrings);
checkMD5ofHeaderFile(header, "4648aa1169257e0a8a9d30131adb5f35"); checkMD5ofHeaderFile(header, "47d32e7901650ba69ed41322af638806");
} }
@Test @Test
public void testVCF4ToVCF4_alternate() { public void testVCF4ToVCF4_alternate() {
VCFHeader header = createHeader(VCF4headerStrings_with_negativeOne); VCFHeader header = createHeader(VCF4headerStrings_with_negativeOne);
checkMD5ofHeaderFile(header, "ad8c4cf85e868b0261ab49ee2c613088"); checkMD5ofHeaderFile(header, "954e9dd756d5f952cfb401a4db6bd145");
} }
/** /**
@ -101,7 +101,7 @@ public class VCFHeaderUnitTest extends BaseTest {
for (VCFHeaderLine line : header.getMetaData()) for (VCFHeaderLine line : header.getMetaData())
pw.println(line); pw.println(line);
pw.close(); pw.close();
Assert.assertTrue(md5sum.equals(md5SumFile(myTempFile))); Assert.assertEquals(md5SumFile(myTempFile), md5sum);
} }
public static int VCF4headerStringCount = 16; public static int VCF4headerStringCount = 16;