diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/AlleleFrequencyCalculationModel.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/AlleleFrequencyCalculationModel.java
index 63c0cf447..a7e56dee8 100755
--- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/AlleleFrequencyCalculationModel.java
+++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/AlleleFrequencyCalculationModel.java
@@ -104,7 +104,7 @@ public abstract class AlleleFrequencyCalculationModel implements Cloneable {
                                                              double[] log10AlleleFrequencyPosteriors,
                                                              int AFofMaxLikelihood);
 
-    protected int getUnfilteredDepth(ReadBackedPileup pileup) {
+    protected int getFilteredDepth(ReadBackedPileup pileup) {
         int count = 0;
         for ( PileupElement p : pileup ) {
             if ( DiploidSNPGenotypeLikelihoods.usableBase(p, true) )
diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/ExactAFCalculationModel.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/ExactAFCalculationModel.java
index 88aeb7f6d..5b5a860f6 100755
--- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/ExactAFCalculationModel.java
+++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/ExactAFCalculationModel.java
@@ -224,7 +224,7 @@ public class ExactAFCalculationModel extends AlleleFrequencyCalculationModel {
 
             HashMap<String, Object> attributes = new HashMap<String, Object>();
             ArrayList<Allele> myAlleles = new ArrayList<Allele>();
-            attributes.put(VCFConstants.DEPTH_KEY, getUnfilteredDepth(contexts.get(sample).getContext(StratifiedAlignmentContext.StratifiedContextType.COMPLETE).getBasePileup()));
+            attributes.put(VCFConstants.DEPTH_KEY, getFilteredDepth(contexts.get(sample).getContext(StratifiedAlignmentContext.StratifiedContextType.COMPLETE).getBasePileup()));
             double qual;
             double[] posteriors = GLs.get(sample).getPosteriors();
 
diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/GridSearchAFEstimation.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/GridSearchAFEstimation.java
index 22929526f..5affc6da4 100755
--- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/GridSearchAFEstimation.java
+++ b/java/src/org/broadinstitute/sting/playground/gatk/walkers/genotyper/GridSearchAFEstimation.java
@@ -125,7 +125,7 @@ public class GridSearchAFEstimation extends AlleleFrequencyCalculationModel {
             }
 
             HashMap<String, Object> attributes = new HashMap<String, Object>();
-            attributes.put(VCFConstants.DEPTH_KEY, getUnfilteredDepth(contexts.get(sample).getContext(StratifiedAlignmentContext.StratifiedContextType.COMPLETE).getBasePileup()));
+            attributes.put(VCFConstants.DEPTH_KEY, getFilteredDepth(contexts.get(sample).getContext(StratifiedAlignmentContext.StratifiedContextType.COMPLETE).getBasePileup()));
 
             GenotypeLikelihoods likelihoods = new GenotypeLikelihoods(GL.getLikelihoods());
             attributes.put(VCFConstants.GENOTYPE_LIKELIHOODS_KEY, likelihoods.getAsString());