From 51fdf9d70115f73f66035e34975103a63763eb34 Mon Sep 17 00:00:00 2001
From: kiran <kiran@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Mon, 27 Sep 2010 05:43:08 +0000
Subject: [PATCH] Default memory limit is now 4g (apparently necessary when
 testing on full 100-sample Autism_Daly dataset)

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4359 348d0f76-0448-11de-a6fe-93d51630548a
---
 scala/qscript/fullCallingPipeline.q | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/scala/qscript/fullCallingPipeline.q b/scala/qscript/fullCallingPipeline.q
index d0f5e8e86..f3892e3fb 100755
--- a/scala/qscript/fullCallingPipeline.q
+++ b/scala/qscript/fullCallingPipeline.q
@@ -61,7 +61,7 @@ class fullCallingPipeline extends QScript {
     this.intervals = qscript.pipeline.getProject.getIntervalList
     this.jarFile = qscript.gatkJar
     this.reference_sequence = qscript.pipeline.getProject.getReferenceFile
-    this.memoryLimit = Some(2)
+    this.memoryLimit = Some(4)
   }