diff --git a/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java b/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java index 129ac9ca8..155a539c7 100755 --- a/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java +++ b/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java @@ -822,8 +822,10 @@ public class VariantContext implements Feature { // to enable tribble intergrati // --------------------------------------------------------------------------------------------------------- private void loadGenotypes() { - if ( !hasAttribute(UNPARSED_GENOTYPE_MAP_KEY) ) + if ( !hasAttribute(UNPARSED_GENOTYPE_MAP_KEY) ) { + genotypes = NO_GENOTYPES; return; + } Object parserObj = getAttribute(UNPARSED_GENOTYPE_PARSER_KEY); if ( parserObj == null || !(parserObj instanceof VCFParser) )