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Using job ids instead of job names for LSF dependency tracking. 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4071 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
kshakir 2010-08-19 23:42:06 +00:00
parent fa36731faf
commit 51678d48e4
1 changed files with 3 additions and 3 deletions
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6
scala/src/org/broadinstitute/sting/queue/engine/LsfJobRunner.scala
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@ -67,10 +67,10 @@ class LsfJobRunner extends DispatchJobRunner with Logging {
* @return The dependency expression for the prior jobs. * @return The dependency expression for the prior jobs.
*/ */
private def dependencyExpression(jobs: Iterable[LsfJob], runOnSuccess: Boolean) = { private def dependencyExpression(jobs: Iterable[LsfJob], runOnSuccess: Boolean) = {
val jobNames = jobs.toSet[LsfJob].map(_.name) val jobIds = jobs.toSet[LsfJob].map(_.bsubJobId)
if (runOnSuccess) if (runOnSuccess)
jobNames.mkString("done(\"", "\") && done(\"", "\")") jobIds.mkString("done(", ") && done(", ")")
else else
jobNames.mkString("ended(\"", "\") && ended(\"", "\")") jobIds.mkString("ended(", ") && ended(", ")")
} }
} }