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Have VF write to sdout when no -o is supplied 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4282 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
ebanks 2010-09-15 01:48:33 +00:00
parent 1901e3208e
commit 514b28210e
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/walkers/filters/VariantFiltrationWalker.java
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@ -50,7 +50,7 @@ import java.util.*;
@Reference(window=@Window(start=-50,stop=50))
public class VariantFiltrationWalker extends RodWalker<Integer, Integer> {
@Output(doc="File to which variants should be written",required=false)
@Output(doc="File to which variants should be written", required=true)
protected VCFWriter writer = null;
@Argument(fullName="filterExpression", shortName="filter", doc="One or more expression used with INFO fields to filter (see wiki docs for more info)", required=false)