diff --git a/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java b/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java index 27a5b0c24..12f9cb20c 100755 --- a/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java +++ b/public/java/src/org/broadinstitute/sting/utils/variantcontext/VariantContext.java @@ -184,9 +184,6 @@ public class VariantContext implements Feature { // to enable tribble integratio protected CommonInfo commonInfo = null; public final static double NO_LOG10_PERROR = CommonInfo.NO_LOG10_PERROR; - @Deprecated // ID is no longer stored in the attributes map - private final static String ID_KEY = "ID"; - public final static Set PASSES_FILTERS = Collections.unmodifiableSet(new LinkedHashSet()); /** The location of this VariantContext */ @@ -287,10 +284,6 @@ public class VariantContext implements Feature { // to enable tribble integratio this.commonInfo = new CommonInfo(source, log10PError, filters, attributes); - // todo -- remove me when this check is no longer necessary - if ( this.commonInfo.hasAttribute(ID_KEY) ) - throw new IllegalArgumentException("Trying to create a VariantContext with a ID key. Please use provided constructor argument ID"); - if ( alleles == null ) { throw new IllegalArgumentException("Alleles cannot be null"); } // we need to make this a LinkedHashSet in case the user prefers a given ordering of alleles