diff --git a/public/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusShardDataProvider.java b/public/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusShardDataProvider.java index 55304da34..4888b9f41 100644 --- a/public/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusShardDataProvider.java +++ b/public/java/src/org/broadinstitute/sting/gatk/datasources/providers/LocusShardDataProvider.java @@ -22,11 +22,6 @@ public class LocusShardDataProvider extends ShardDataProvider { */ private final ReadProperties sourceInfo; - /** - * The parser, used to create and build new GenomeLocs. - */ - private final GenomeLocParser genomeLocParser; - /** * The particular locus for which data is provided. Should be contained within shard.getGenomeLocs(). */ @@ -45,7 +40,6 @@ public class LocusShardDataProvider extends ShardDataProvider { public LocusShardDataProvider(Shard shard, ReadProperties sourceInfo, GenomeLocParser genomeLocParser, GenomeLoc locus, LocusIterator locusIterator, IndexedFastaSequenceFile reference, Collection rods) { super(shard,genomeLocParser,reference,rods); this.sourceInfo = sourceInfo; - this.genomeLocParser = genomeLocParser; this.locus = locus; this.locusIterator = locusIterator; }