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Fixed bad expected value in PedReaderUnitTest

This commit is contained in:
Mark DePristo 2011-10-06 08:16:47 -07:00
parent daa5999489
commit 4b5b9155a9
1 changed files with 2 additions and 2 deletions
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4
public/java/test/org/broadinstitute/sting/gatk/samples/PedReaderUnitTest.java
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@ -158,7 +158,7 @@ public class PedReaderUnitTest extends BaseTest {
// Quantitative trait
new PedReaderTest("OtherPhenotype",
Arrays.asList(
new Sample("s1", "fam1", null, null, Gender.MALE, Affection.OTHER, "1.0"),
new Sample("s1", "fam1", null, null, Gender.MALE, Affection.OTHER, "1"),
new Sample("s2", "fam2", null, null, Gender.FEMALE, Affection.OTHER, "10.0")),
String.format("%s%n%s",
"fam1 s1 0 0 1 1",
@ -188,7 +188,7 @@ public class PedReaderUnitTest extends BaseTest {
PedReader reader = new PedReader();
SampleDB sampleDB = new SampleDB();
List<Sample> readSamples = reader.parse(myFileContents, missing, sampleDB);
Assert.assertEquals(new HashSet<Sample>(test.expectedSamples), new HashSet<Sample>(readSamples), "Parsed incorrect number of samples");
Assert.assertEquals(new HashSet<Sample>(test.expectedSamples), new HashSet<Sample>(readSamples));
}
@Test(enabled = true, dataProvider = "readerTest")