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too hasty... cleaning up debug messages ;) 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5257 348d0f76-0448-11de-a6fe-93d51630548a
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carneiro 2011-02-17 02:11:03 +00:00
parent b4da843c49
commit 497e9ab83b
1 changed files with 0 additions and 2 deletions
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2
scala/qscript/oneoffs/carneiro/dataProcessing.scala
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@ -44,8 +44,6 @@ class dataProcessing extends QScript {
bamList.foreach { bam =>
println("DEBUG: bam = " + new File(bam))
// Files generated by the pipeline
val baseName: String = swapExt(new File(bam.substring(bam.lastIndexOf("/")+1)), ".bam", "").toString()
val cleanedBam: String = baseName + ".cleaned.bam"