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Finishing up the playground cleanup (for now) 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4135 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
ebanks 2010-08-27 01:19:37 +00:00
parent 0452b1ab68
commit 4979dcc9a7
3 changed files with 4 additions and 4 deletions
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2
java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/GATKPaperGenotyper.java
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@ -23,7 +23,7 @@
* THE USE OR OTHER DEALINGS IN THE SOFTWARE. * THE USE OR OTHER DEALINGS IN THE SOFTWARE.
*/ */
package org.broadinstitute.sting.playground.gatk.walkers.papergenotyper; package org.broadinstitute.sting.gatk.examples.papergenotyper;
import org.broadinstitute.sting.gatk.contexts.AlignmentContext; import org.broadinstitute.sting.gatk.contexts.AlignmentContext;
import org.broadinstitute.sting.gatk.contexts.ReferenceContext; import org.broadinstitute.sting.gatk.contexts.ReferenceContext;

2
java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/SimpleCall.java
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@ -1,4 +1,4 @@
package org.broadinstitute.sting.playground.gatk.walkers.papergenotyper; package org.broadinstitute.sting.gatk.examples.papergenotyper;
import org.broadinstitute.sting.utils.GenomeLoc; import org.broadinstitute.sting.utils.GenomeLoc;

4
java/src/org/broadinstitute/sting/playground/gatk/walkers/qc/CountPairsWalker.java → java/src/org/broadinstitute/sting/gatk/walkers/qc/CountPairsWalker.java
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@ -1,5 +1,5 @@
/* /*
* Copyright (c) 2010 The Broad Institute * Copyright (c) 2010.
* *
* Permission is hereby granted, free of charge, to any person * Permission is hereby granted, free of charge, to any person
* obtaining a copy of this software and associated documentation * obtaining a copy of this software and associated documentation
@ -23,7 +23,7 @@
* THE USE OR OTHER DEALINGS IN THE SOFTWARE. * THE USE OR OTHER DEALINGS IN THE SOFTWARE.
*/ */
package org.broadinstitute.sting.playground.gatk.walkers.qc; package org.broadinstitute.sting.gatk.walkers.qc;
import org.broadinstitute.sting.gatk.walkers.ReadPairWalker; import org.broadinstitute.sting.gatk.walkers.ReadPairWalker;
import org.broadinstitute.sting.utils.collections.ExpandingArrayList; import org.broadinstitute.sting.utils.collections.ExpandingArrayList;