diff --git a/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/GATKPaperGenotyper.java b/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/GATKPaperGenotyper.java index 0c6b17c43..186ce7daa 100644 --- a/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/GATKPaperGenotyper.java +++ b/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/GATKPaperGenotyper.java @@ -23,7 +23,7 @@ * THE USE OR OTHER DEALINGS IN THE SOFTWARE. */ -package org.broadinstitute.sting.playground.gatk.walkers.papergenotyper; +package org.broadinstitute.sting.gatk.examples.papergenotyper; import org.broadinstitute.sting.gatk.contexts.AlignmentContext; import org.broadinstitute.sting.gatk.contexts.ReferenceContext; diff --git a/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/SimpleCall.java b/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/SimpleCall.java index 1b4772817..e1ba8379c 100644 --- a/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/SimpleCall.java +++ b/java/src/org/broadinstitute/sting/gatk/examples/papergenotyper/SimpleCall.java @@ -1,4 +1,4 @@ -package org.broadinstitute.sting.playground.gatk.walkers.papergenotyper; +package org.broadinstitute.sting.gatk.examples.papergenotyper; import org.broadinstitute.sting.utils.GenomeLoc; diff --git a/java/src/org/broadinstitute/sting/playground/gatk/walkers/qc/CountPairsWalker.java b/java/src/org/broadinstitute/sting/gatk/walkers/qc/CountPairsWalker.java similarity index 97% rename from java/src/org/broadinstitute/sting/playground/gatk/walkers/qc/CountPairsWalker.java rename to java/src/org/broadinstitute/sting/gatk/walkers/qc/CountPairsWalker.java index f2145411d..cece04fcf 100644 --- a/java/src/org/broadinstitute/sting/playground/gatk/walkers/qc/CountPairsWalker.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/qc/CountPairsWalker.java @@ -1,5 +1,5 @@ /* - * Copyright (c) 2010 The Broad Institute + * Copyright (c) 2010. * * Permission is hereby granted, free of charge, to any person * obtaining a copy of this software and associated documentation @@ -23,7 +23,7 @@ * THE USE OR OTHER DEALINGS IN THE SOFTWARE. */ -package org.broadinstitute.sting.playground.gatk.walkers.qc; +package org.broadinstitute.sting.gatk.walkers.qc; import org.broadinstitute.sting.gatk.walkers.ReadPairWalker; import org.broadinstitute.sting.utils.collections.ExpandingArrayList;