diff --git a/public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotator.java b/public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotator.java index efa40d9a8..54231e9b4 100755 --- a/public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotator.java +++ b/public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/VariantAnnotator.java @@ -58,7 +58,7 @@ public class VariantAnnotator extends RodWalker { @ArgumentCollection protected StandardVariantContextInputArgumentCollection variantCollection = new StandardVariantContextInputArgumentCollection(); @Input(fullName="snpEffFile", shortName = "snpEffFile", doc="SnpEff file", required=false) - public RodBinding snpEffFile; + public RodBinding snpEffFile = RodBinding.makeUnbound(SnpEffFeature.class); /** * A dbSNP VCF file from which to annotate.