From 43625f652e7bb70e4c2507f05a0c9997aeaf655c Mon Sep 17 00:00:00 2001 From: Eric Banks Date: Sat, 27 Oct 2012 19:43:46 -0400 Subject: [PATCH] Shoot, mixed up the md5s last time. --- .../walkers/genotyper/UnifiedGenotyperIntegrationTest.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java b/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java index 49651100a..9212d0e53 100755 --- a/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java +++ b/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java @@ -361,7 +361,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( baseCommandIndelsb37 + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -out_mode EMIT_ALL_SITES -alleles " + privateTestDir + vcf + " -I " + validationDataLocation + "NA12878.HiSeq.WGS.bwa.cleaned.recal.hg19.20.bam -o %s -L " + validationDataLocation + vcf, 1, - Arrays.asList("9a7cd58b9e3d5b72608c0d529321deba")); + Arrays.asList("d76eacc4021b78ccc0a9026162e814a7")); executeTest("test GENOTYPE_GIVEN_ALLELES with no evidence in reads", spec); } @@ -451,7 +451,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { public void testReducedBam() { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( "-T UnifiedGenotyper -R " + b37KGReference + " --no_cmdline_in_header -I " + privateTestDir + "bamExample.ReducedRead.ADAnnotation.bam -o %s -L 1:67,225,396-67,288,518", 1, - Arrays.asList("1b711c0966a2f76eb21801e73b76b758")); + Arrays.asList("9a7cd58b9e3d5b72608c0d529321deba")); executeTest("test calling on a ReducedRead BAM", spec); }