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Shoot, mixed up the md5s last time.

This commit is contained in:
Eric Banks 2012-10-27 19:43:46 -04:00
parent f3ac5d404d
commit 43625f652e
1 changed files with 2 additions and 2 deletions
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4
public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
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@ -361,7 +361,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec(
baseCommandIndelsb37 + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -out_mode EMIT_ALL_SITES -alleles " + privateTestDir + vcf + " -I " + validationDataLocation +
"NA12878.HiSeq.WGS.bwa.cleaned.recal.hg19.20.bam -o %s -L " + validationDataLocation + vcf, 1,
Arrays.asList("9a7cd58b9e3d5b72608c0d529321deba"));
Arrays.asList("d76eacc4021b78ccc0a9026162e814a7"));
executeTest("test GENOTYPE_GIVEN_ALLELES with no evidence in reads", spec);
}
@ -451,7 +451,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
public void testReducedBam() {
WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec(
"-T UnifiedGenotyper -R " + b37KGReference + " --no_cmdline_in_header -I " + privateTestDir + "bamExample.ReducedRead.ADAnnotation.bam -o %s -L 1:67,225,396-67,288,518", 1,
Arrays.asList("1b711c0966a2f76eb21801e73b76b758"));
Arrays.asList("9a7cd58b9e3d5b72608c0d529321deba"));
executeTest("test calling on a ReducedRead BAM", spec);
}