diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/indels/IndelRealignerIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/indels/IndelRealignerIntegrationTest.java index c612878ac..5f3b795f7 100755 --- a/java/test/org/broadinstitute/sting/gatk/walkers/indels/IndelRealignerIntegrationTest.java +++ b/java/test/org/broadinstitute/sting/gatk/walkers/indels/IndelRealignerIntegrationTest.java @@ -10,7 +10,7 @@ public class IndelRealignerIntegrationTest extends WalkerTest { @Test public void testRealigner() { - String[] md5lod5 = {"67c3fc25e9d192cc5fbfd48ade0efc84", "86778f92b0fa6aa7c26e651c8c1eb320"}; + String[] md5lod5 = {"96edef86cea95f312ee8295b38227eb8", "d4d8ff567b614729ab8c52bd7d6bef48"}; WalkerTestSpec spec1 = new WalkerTestSpec( "-T IndelRealigner -noPG -LOD 5 -maxConsensuses 100 -greedy 100 -R " + oneKGLocation + "reference/human_b36_both.fasta -I " + validationDataLocation + "NA12878.chrom1.SLX.SRP000032.2009_06.bam -L 1:10023800-10332350 -compress 1 -targetIntervals " + validationDataLocation + "cleaner.test.intervals -O %s -snps %s", 2,