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slight change in output format 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3559 348d0f76-0448-11de-a6fe-93d51630548a
This commit is contained in:
asivache 2010-06-15 14:52:04 +00:00
parent 32fc221ffe
commit 42b8a8f295
1 changed files with 1 additions and 1 deletions
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2
java/src/org/broadinstitute/sting/gatk/walkers/qc/CycleQualityWalker.java
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@ -311,7 +311,7 @@ public class CycleQualityWalker extends ReadWalker<Integer,Integer> {
if ( HTML ) out.println("<hr>"); if ( HTML ) out.println("<hr>");
if ( HTML ) out.println("<br>"); if ( HTML ) out.println("<br>");
out.println("\nOUTCOME:"); out.println("\nOUTCOME (threshold at Q="+QTHRESHOLD+"):");
if ( HTML ) out.println("<br>"); if ( HTML ) out.println("<br>");
for ( String col : columns ) { for ( String col : columns ) {
List<PrimitivePair.Int> lp = problems.get(col+".End1"); List<PrimitivePair.Int> lp = problems.get(col+".End1");