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LSF long times are in seconds, convert to milliseconds to meet standard

This commit is contained in:
Mark DePristo 2011-08-26 09:18:28 -04:00
parent c11ddf3da3
commit 415d5d5301
1 changed files with 3 additions and 2 deletions
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5
public/scala/src/org/broadinstitute/sting/queue/engine/lsf/Lsf706JobRunner.scala
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@ -273,8 +273,9 @@ object Lsf706JobRunner extends Logging {
logger.debug("Job Id %s status / exitStatus / exitInfo: 0x%02x / 0x%02x / 0x%02x".format(runner.jobId, jobStatus, exitStatus, exitInfo)) logger.debug("Job Id %s status / exitStatus / exitInfo: 0x%02x / 0x%02x / 0x%02x".format(runner.jobId, jobStatus, exitStatus, exitInfo))
def updateRunInfo() { def updateRunInfo() {
runner.getRunInfo.startTime = new Date(jobInfo.startTime.longValue) // the platform LSF startTimes are in seconds, not milliseconds, so convert to the java convention
runner.getRunInfo.doneTime = new Date(jobInfo.endTime.longValue) runner.getRunInfo.startTime = new Date(jobInfo.startTime.longValue * 1000)
runner.getRunInfo.doneTime = new Date(jobInfo.endTime.longValue * 1000)
} }
runner.updateStatus( runner.updateStatus(