From 3feead019d9ecc0324e1bd5a53c59eb1e5988629 Mon Sep 17 00:00:00 2001
From: alecw <alecw@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Mon, 11 Jan 2010 20:49:13 +0000
Subject: [PATCH] New Picard and SAM-JDK with automatic sequence name
 truncation

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2557 348d0f76-0448-11de-a6fe-93d51630548a
---
 settings/repository/net.sf/picard-1.11.225.xml      |   3 ---
 .../{picard-1.11.225.jar => picard-1.12.256.jar}    | Bin
 settings/repository/net.sf/picard-1.12.256.xml      |   3 +++
 settings/repository/net.sf/sam-1.11.225.xml         |   3 ---
 .../net.sf/{sam-1.11.225.jar => sam-1.12.256.jar}   | Bin
 settings/repository/net.sf/sam-1.12.256.xml         |   3 +++
 6 files changed, 6 insertions(+), 6 deletions(-)
 delete mode 100644 settings/repository/net.sf/picard-1.11.225.xml
 rename settings/repository/net.sf/{picard-1.11.225.jar => picard-1.12.256.jar} (100%)
 create mode 100644 settings/repository/net.sf/picard-1.12.256.xml
 delete mode 100644 settings/repository/net.sf/sam-1.11.225.xml
 rename settings/repository/net.sf/{sam-1.11.225.jar => sam-1.12.256.jar} (100%)
 create mode 100644 settings/repository/net.sf/sam-1.12.256.xml

diff --git a/settings/repository/net.sf/picard-1.11.225.xml b/settings/repository/net.sf/picard-1.11.225.xml
deleted file mode 100644
index a993ee9c6..000000000
--- a/settings/repository/net.sf/picard-1.11.225.xml
+++ /dev/null
@@ -1,3 +0,0 @@
-<ivy-module version="1.0">
-    <info organisation="net.sf" module="picard" revision="1.11.225" status="release" />
-</ivy-module>
diff --git a/settings/repository/net.sf/picard-1.11.225.jar b/settings/repository/net.sf/picard-1.12.256.jar
similarity index 100%
rename from settings/repository/net.sf/picard-1.11.225.jar
rename to settings/repository/net.sf/picard-1.12.256.jar
diff --git a/settings/repository/net.sf/picard-1.12.256.xml b/settings/repository/net.sf/picard-1.12.256.xml
new file mode 100644
index 000000000..9df3e9c08
--- /dev/null
+++ b/settings/repository/net.sf/picard-1.12.256.xml
@@ -0,0 +1,3 @@
+<ivy-module version="1.0">
+    <info organisation="net.sf" module="picard" revision="1.12.256" status="release" />
+</ivy-module>
diff --git a/settings/repository/net.sf/sam-1.11.225.xml b/settings/repository/net.sf/sam-1.11.225.xml
deleted file mode 100644
index c603dfc29..000000000
--- a/settings/repository/net.sf/sam-1.11.225.xml
+++ /dev/null
@@ -1,3 +0,0 @@
-<ivy-module version="1.0">
-    <info organisation="net.sf" module="sam" revision="1.11.225" status="release" />
-</ivy-module>
diff --git a/settings/repository/net.sf/sam-1.11.225.jar b/settings/repository/net.sf/sam-1.12.256.jar
similarity index 100%
rename from settings/repository/net.sf/sam-1.11.225.jar
rename to settings/repository/net.sf/sam-1.12.256.jar
diff --git a/settings/repository/net.sf/sam-1.12.256.xml b/settings/repository/net.sf/sam-1.12.256.xml
new file mode 100644
index 000000000..7ef6d82d7
--- /dev/null
+++ b/settings/repository/net.sf/sam-1.12.256.xml
@@ -0,0 +1,3 @@
+<ivy-module version="1.0">
+    <info organisation="net.sf" module="sam" revision="1.12.256" status="release" />
+</ivy-module>