diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/beagle/ProduceBeagleInputWalker.java b/java/src/org/broadinstitute/sting/gatk/walkers/beagle/ProduceBeagleInputWalker.java
index 202227249..8edd31eb5 100755
--- a/java/src/org/broadinstitute/sting/gatk/walkers/beagle/ProduceBeagleInputWalker.java
+++ b/java/src/org/broadinstitute/sting/gatk/walkers/beagle/ProduceBeagleInputWalker.java
@@ -73,11 +73,6 @@ public class ProduceBeagleInputWalker extends RodWalker<Integer, Integer> {
     @Argument(doc="VQSqual key", shortName = "vqskey", required=false)
     protected String VQSLOD_KEY = "VQSqual";
 
-    @Hidden
-    @Argument(doc="REMOVE ME", shortName = "rcwpio", required=false)
-    private static final boolean REMAIN_COMPATIBLE_WITH_PREVIOUS_IO = false;
-
-
 //    @Hidden
 //    @Argument(doc="Include filtered records", shortName = "ifr", fullName = "IncludeFilteredRecords", required=false)
 //    protected boolean includeFilteredRecords = false;
@@ -275,14 +270,9 @@ public class ProduceBeagleInputWalker extends RodWalker<Integer, Integer> {
 
         double[] normalizedLikelihoods = MathUtils.normalizeFromLog10(log10Likelihoods);
         // see if we need to randomly mask out genotype in this position.
-        // todo -- remove me after testing
-        if ( REMAIN_COMPATIBLE_WITH_PREVIOUS_IO && (log10Likelihoods == HAPLOID_FLAT_LOG10_LIKELIHOODS || log10Likelihoods == DIPLOID_FLAT_LOG10_LIKELIHOODS) )
-            for (double likeVal: normalizedLikelihoods)
-                out.append(String.format("%.2f ",likeVal));
-        else
-            for (double likeVal: normalizedLikelihoods) {
-                out.append(String.format("%5.4f ",likeVal));
-            }
+        for (double likeVal: normalizedLikelihoods) {
+            out.append(String.format("%5.4f ",likeVal));
+        }
     }
 
 
diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/beagle/BeagleIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/beagle/BeagleIntegrationTest.java
index 08ccbb324..ed29865c8 100755
--- a/java/test/org/broadinstitute/sting/gatk/walkers/beagle/BeagleIntegrationTest.java
+++ b/java/test/org/broadinstitute/sting/gatk/walkers/beagle/BeagleIntegrationTest.java
@@ -60,7 +60,7 @@ public class BeagleIntegrationTest extends WalkerTest {
                 "-T ProduceBeagleInput -B:variant,VCF /humgen/gsa-hpprojects/GATK/data/Validation_Data/NA12878_HSQ_chr22_14-16m.vcf "+
                         "-B:validation,VCF /humgen/gsa-hpprojects/GATK/data/Validation_Data/NA12878_OMNI_chr22_14-16m.vcf "+
                         "-L 22:14000000-16000000 -o %s -bvcf %s -bs 0.8 -valp 0.98 -R /humgen/1kg/reference/human_g1k_v37.fasta -NO_HEADER ",2,
-                Arrays.asList("44d28b6b092d5f4c0ae59af442612ea3","223fb977e8db567dcaf632c6ee51f294"));
+                Arrays.asList("660986891b30cdc937e0f2a3a5743faa","223fb977e8db567dcaf632c6ee51f294"));
         executeTest("test BeagleInputWithBootstrap",spec);
     }