diff --git a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/examples/ExampleUnifiedGenotyper.scala b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/examples/ExampleUnifiedGenotyper.scala index 4a93233eb..1d473b210 100644 --- a/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/examples/ExampleUnifiedGenotyper.scala +++ b/public/scala/qscript/org/broadinstitute/sting/queue/qscripts/examples/ExampleUnifiedGenotyper.scala @@ -59,10 +59,10 @@ class ExampleUnifiedGenotyper extends QScript { evalUnfiltered.rodBind :+= RodBind("eval", "VCF", genotyper.out) evalUnfiltered.out = swapExt(genotyper.out, "vcf", "eval") - variantFilter.rodBind :+= RodBind("vcf", "VCF", genotyper.out) + variantFilter.rodBind :+= RodBind("variant", "VCF", genotyper.out) variantFilter.out = swapExt(qscript.bamFile, "bam", "filtered.vcf") variantFilter.filterName = filterNames - variantFilter.filterExpression = filterExpressions + variantFilter.filterExpression = filterExpressions.map("\"" + _ + "\"") evalFiltered.rodBind :+= RodBind("eval", "VCF", variantFilter.out) evalFiltered.out = swapExt(variantFilter.out, "vcf", "eval")