Oops...omitted walker.initialize().

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@504 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-23 17:35:28 +00:00 · 2009-04-23 17:35:28 +00:00 · 3d7575bbb8
parent 11e85f1969
commit 3d7575bbb8
1 changed files with 1 additions and 0 deletions
--- a/java/src/org/broadinstitute/sting/gatk/executive/MicroManager.java
+++ b/java/src/org/broadinstitute/sting/gatk/executive/MicroManager.java
@ -103,6 +103,7 @@ public class MicroManager {
            throw new RuntimeException( ex );
        }

+        walker.initialize();
        Object accumulator = ((LocusWalker<?,?>)walker).reduceInit();

        for(Shard shard: shardStrategy) {