From 3d628f06f0ed9e931b7fa7828aab96d8b8c086ba Mon Sep 17 00:00:00 2001 From: depristo Date: Thu, 2 Jun 2011 21:25:26 +0000 Subject: [PATCH] moved to playground git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5925 348d0f76-0448-11de-a6fe-93d51630548a --- .../gatk}/walkers/reducereads/BaseCounts.java | 0 .../gatk}/walkers/reducereads/ConsensusReadCompressor.java | 0 .../gatk}/walkers/reducereads/ConsensusSite.java | 0 .../gatk}/walkers/reducereads/ConsensusSpan.java | 0 .../walkers/reducereads/MultiSampleConsensusReadCompressor.java | 0 .../gatk}/walkers/reducereads/ReduceReadsWalker.java | 0 .../gatk}/walkers/reducereads/ReducingSAMFileWriter.java | 0 .../gatk}/walkers/reducereads/RefPileupElement.java | 0 .../walkers/reducereads/SingleSampleConsensusReadCompressor.java | 0 9 files changed, 0 insertions(+), 0 deletions(-) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/BaseCounts.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/ConsensusReadCompressor.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/ConsensusSite.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/ConsensusSpan.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/MultiSampleConsensusReadCompressor.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/ReduceReadsWalker.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/ReducingSAMFileWriter.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/RefPileupElement.java (100%) rename java/src/org/broadinstitute/sting/{oneoffprojects => playground/gatk}/walkers/reducereads/SingleSampleConsensusReadCompressor.java (100%) diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/BaseCounts.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/BaseCounts.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/BaseCounts.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/BaseCounts.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ConsensusReadCompressor.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ConsensusReadCompressor.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ConsensusReadCompressor.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ConsensusReadCompressor.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ConsensusSite.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ConsensusSite.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ConsensusSite.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ConsensusSite.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ConsensusSpan.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ConsensusSpan.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ConsensusSpan.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ConsensusSpan.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/MultiSampleConsensusReadCompressor.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/MultiSampleConsensusReadCompressor.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/MultiSampleConsensusReadCompressor.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/MultiSampleConsensusReadCompressor.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ReduceReadsWalker.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ReduceReadsWalker.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ReduceReadsWalker.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ReduceReadsWalker.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ReducingSAMFileWriter.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ReducingSAMFileWriter.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/ReducingSAMFileWriter.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/ReducingSAMFileWriter.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/RefPileupElement.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/RefPileupElement.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/RefPileupElement.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/RefPileupElement.java diff --git a/java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/SingleSampleConsensusReadCompressor.java b/java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/SingleSampleConsensusReadCompressor.java similarity index 100% rename from java/src/org/broadinstitute/sting/oneoffprojects/walkers/reducereads/SingleSampleConsensusReadCompressor.java rename to java/src/org/broadinstitute/sting/playground/gatk/walkers/reducereads/SingleSampleConsensusReadCompressor.java