From 3a0dd4b175e960522061eb7b3f367bfe73ef05e1 Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Wed, 9 Jan 2013 11:12:28 -0500
Subject: [PATCH] Oops, I broke the build.  NOW we shouldn't have any more
 public->protected dependancies.

---
 .../sting/gatk/walkers/variantutils/SelectVariants.java        | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/protected/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java b/protected/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java
index cffd405b1..dd92961cf 100755
--- a/protected/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java
+++ b/protected/java/src/org/broadinstitute/sting/gatk/walkers/variantutils/SelectVariants.java
@@ -33,6 +33,7 @@ import org.broadinstitute.sting.gatk.contexts.ReferenceContext;
 import org.broadinstitute.sting.gatk.refdata.RefMetaDataTracker;
 import org.broadinstitute.sting.gatk.walkers.RodWalker;
 import org.broadinstitute.sting.gatk.walkers.TreeReducible;
+import org.broadinstitute.sting.gatk.walkers.annotator.ChromosomeCountConstants;
 import org.broadinstitute.sting.gatk.walkers.annotator.ChromosomeCounts;
 import org.broadinstitute.sting.gatk.walkers.genotyper.GenotypeLikelihoodsCalculationModel;
 import org.broadinstitute.sting.gatk.walkers.genotyper.UnifiedArgumentCollection;
@@ -423,7 +424,7 @@ public class SelectVariants extends RodWalker<Integer, Integer> implements TreeR
             headerLines.add(new VCFInfoHeaderLine("AF_Orig", 1, VCFHeaderLineType.Float, "Original AF"));
             headerLines.add(new VCFInfoHeaderLine("AN_Orig", 1, VCFHeaderLineType.Integer, "Original AN"));
         }
-        headerLines.addAll(Arrays.asList(ChromosomeCounts.descriptions));
+        headerLines.addAll(Arrays.asList(ChromosomeCountConstants.descriptions));
         headerLines.add(VCFStandardHeaderLines.getInfoLine(VCFConstants.DEPTH_KEY));
 
         for (int i = 0; i < SELECT_EXPRESSIONS.size(); i++) {