From ef957573116b035905dee96e27b15f4288c5c3b3 Mon Sep 17 00:00:00 2001
From: Eric Banks <ebanks@broadinstitute.org>
Date: Mon, 3 Dec 2012 21:46:46 -0500
Subject: [PATCH] Fix MD5 because of a need to fix a busted bam file in our
 validation directory (it used the wrong quality score encoding...)

---
 .../gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/protected/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java b/protected/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
index 88f2ab3ea..64cd10225 100755
--- a/protected/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
+++ b/protected/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
@@ -437,7 +437,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
     public void testNsInCigar() {
         WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec(
                 "-T UnifiedGenotyper -R " + b37KGReference + " --no_cmdline_in_header -I " + validationDataLocation + "testWithNs.bam -o %s -L 8:141799600-141814700", 1,
-                Arrays.asList("bd7984a374f0ae5d277bd5fc5065f64f"));
+                Arrays.asList("f388d2ebb05e7269e7f0a7e9b8d2dbaa"));
         executeTest("test calling on reads with Ns in CIGAR", spec);
     }