diff --git a/java/src/org/broadinstitute/sting/gatk/walkers/recalibration/PairedReadOrderCovariate.java b/java/src/org/broadinstitute/sting/gatk/walkers/recalibration/PairedReadOrderCovariate.java index 0a39d4384..798f91399 100644 --- a/java/src/org/broadinstitute/sting/gatk/walkers/recalibration/PairedReadOrderCovariate.java +++ b/java/src/org/broadinstitute/sting/gatk/walkers/recalibration/PairedReadOrderCovariate.java @@ -18,7 +18,7 @@ public class PairedReadOrderCovariate implements ExperimentalCovariate{ } public final Comparable getValue( final String str ) { - return Integer.parseInt( str ); + return str.hashCode(); } // Used to estimate the amount space required for the full data HashMap