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md5s failed because I forgot to add --no_cmdline_in_header so it is different depending on where you run from. Fixed.

This commit is contained in:
Eric Banks 2012-10-07 08:35:55 -04:00
parent a5aaa14aaa
commit 36a26a7da6
1 changed files with 2 additions and 2 deletions
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4
public/java/test/org/broadinstitute/sting/gatk/walkers/variantutils/LiftoverVariantsIntegrationTest.java
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@ -65,9 +65,9 @@ public class LiftoverVariantsIntegrationTest extends WalkerTest {
@Test @Test
public void testLiftoverFilteringOfIndels() { public void testLiftoverFilteringOfIndels() {
WalkerTestSpec spec = new WalkerTestSpec( WalkerTestSpec spec = new WalkerTestSpec(
"-T FilterLiftedVariants -o %s -R " + b37KGReference + " --variant:vcf " + privateTestDir + "liftover_indel_test.vcf", "-T FilterLiftedVariants -o %s -R " + b37KGReference + " --variant:vcf " + privateTestDir + "liftover_indel_test.vcf --no_cmdline_in_header",
1, 1,
Arrays.asList("b9280bb4f310c72284251bc6f2bf2bb2")); Arrays.asList("0909a953291a5e701194668c9b8833ab"));
executeTest("test liftover filtering of indels", spec); executeTest("test liftover filtering of indels", spec);
} }
} }