From 35df80de147093eab16ec51a885562336906bbf8 Mon Sep 17 00:00:00 2001
From: delangel <delangel@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Fri, 3 Jun 2011 23:52:38 +0000
Subject: [PATCH] Updated md5 due to changes to changes in QUAL field when in
 Genotype given alleles mode w/indels when in insertions.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5944 348d0f76-0448-11de-a6fe-93d51630548a
---
 .../gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
index 06d76f4c3..82440d641 100755
--- a/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
+++ b/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
@@ -34,7 +34,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
 
     @Test
     public void testMultiSamplePilot2AndRecallingWithAlleles() {
-        String md5 = "00bf111cb80f1acb29679647f9433e2f";
+        String md5 = "b45636b29891f9df573ad2af6f507ee0";
 
         WalkerTest.WalkerTestSpec spec1 = new WalkerTest.WalkerTestSpec(
                 baseCommand + " -I " + validationDataLocation + "pilot2_daughters.chr20.10k-11k.bam -o %s -L 20:10,000,000-10,050,000", 1,