diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperPerformanceTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperPerformanceTest.java index 1cf2cef38..ac84a8ac7 100755 --- a/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperPerformanceTest.java +++ b/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperPerformanceTest.java @@ -14,6 +14,7 @@ public class UnifiedGenotyperPerformanceTest extends WalkerTest { " -T UnifiedGenotyper" + " -I " + evaluationDataLocation + "NA12878.GAII.chr1.50MB.bam" + " -L chr1:1-50,000,000" + + " -D " + GATKDataLocation + "dbsnp_129_hg18.rod" + " -varout /dev/null", 0, new ArrayList(0)); @@ -27,6 +28,7 @@ public class UnifiedGenotyperPerformanceTest extends WalkerTest { " -T UnifiedGenotyper" + " -I " + evaluationDataLocation + "NA12878.ESP.WEx.chr1.bam" + " -L " + evaluationDataLocation + "whole_exome_agilent_designed_120.targets.chr1.interval_list" + + " -D " + GATKDataLocation + "dbsnp_129_hg18.rod" + " -varout /dev/null", 0, new ArrayList(0)); @@ -41,10 +43,11 @@ public class UnifiedGenotyperPerformanceTest extends WalkerTest { " -I " + evaluationDataLocation + "NA12878.GAII.chr1.50MB.bam" + " -L chr1:1-50,000,000" + " -nt 10" + + " -D " + GATKDataLocation + "dbsnp_129_hg18.rod" + " -varout /dev/null", 0, new ArrayList(0)); executeTest("testUnifiedGenotyperWGParallel", spec); } -} \ No newline at end of file +}