From 343a7b6b2f93a1cc867df19a0dfb939d365af677 Mon Sep 17 00:00:00 2001 From: Mark DePristo Date: Tue, 4 Oct 2011 08:14:00 -0700 Subject: [PATCH] Updating UG integration tests for arbitrary impact of sample order changes on downsampling --- .../walkers/genotyper/UnifiedGenotyperIntegrationTest.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java b/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java index 488b3ccd9..07b2f0566 100755 --- a/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java +++ b/public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java @@ -29,7 +29,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { public void testMultiSamplePilot1() { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( baseCommand + " -I " + validationDataLocation + "low_coverage_CEU.chr1.10k-11k.bam -o %s -L 1:10,022,000-10,025,000", 1, - Arrays.asList("e6639ea2dc81635c706e6c35921406d7")); + Arrays.asList("b27939251539439a382538e507e03507")); executeTest("test MultiSample Pilot1", spec); } @@ -280,7 +280,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest { WalkerTest.WalkerTestSpec spec4 = new WalkerTest.WalkerTestSpec( baseCommandIndelsb37 + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -alleles " + validationDataLocation + "ALL.wgs.union_v2_chr20_100_110K.20101123.indels.sites.vcf -I " + validationDataLocation + "phase1_GBR_realigned.chr20.100K-110K.bam -o %s -L 20:100,000-110,000", 1, - Arrays.asList("4be308fd9e8167ebee677f62a7a753b7")); + Arrays.asList("37e891bf1ac40caec9ea228f39c27e44")); executeTest("test MultiSample 1000G Phase1 indels with complicated records emitting all sites", spec4); }