Script to evaluate SNP and indel calls for the experimental downsampler
-- Calls NA12878 with and without the expt. downsampler on chr1 -- Creates combined vcf, annotating sites as overlapping omni SNPs and Mills indels -- Creates simple combined.table that has chr, pos, set, and type to easily ID missed good sites with the new downsampler
This commit is contained in:
parent
f009424952
commit
33b2f65bbd