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commented out inactive (due to string ==) but actually incorrect code. Sometimes two wrongs do make a right 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2801 348d0f76-0448-11de-a6fe-93d51630548a
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depristo 2010-02-06 16:22:26 +00:00
parent c7e006a996
commit 33760834d6
1 changed files with 2 additions and 2 deletions
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4
java/src/org/broadinstitute/sting/gatk/refdata/rodDbSNP.java
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@ -243,8 +243,8 @@ public class rodDbSNP extends BasicReferenceOrderedDatum implements VariationRod
RS_ID = parts[4]; RS_ID = parts[4];
strand = parts[6]; strand = parts[6];
refBases = parts[7]; refBases = parts[7];
if (strand == "-") //if (strand.equals("-")) // this is just wrong lol
refBases = BaseUtils.simpleReverseComplement(refBases); // refBases = BaseUtils.simpleReverseComplement(refBases);
observed = parts[9]; observed = parts[9];
molType = parts[10]; molType = parts[10];
varType = parts[11]; varType = parts[11];