From 331d6db7837ecd7f13e757956126e214792989fc Mon Sep 17 00:00:00 2001
From: hanna <hanna@348d0f76-0448-11de-a6fe-93d51630548a>
Date: Tue, 5 Jan 2010 18:03:01 +0000
Subject: [PATCH] Reduce file handle usage.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2503 348d0f76-0448-11de-a6fe-93d51630548a
---
 c/bwa/bwa_gateway.cpp | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/c/bwa/bwa_gateway.cpp b/c/bwa/bwa_gateway.cpp
index d524d9be9..9d7b70117 100644
--- a/c/bwa/bwa_gateway.cpp
+++ b/c/bwa/bwa_gateway.cpp
@@ -17,6 +17,8 @@ BWA::BWA(const char* ann_filename,
   reference = new ubyte_t[bns->l_pac/4+1];
   rewind(bns->fp_pac);
   fread(reference, 1, bns->l_pac/4+1, bns->fp_pac);
+  fclose(bns->fp_pac);
+  bns->fp_pac = NULL;
 
   // Load the BWTs (both directions) and suffix arrays (both directions)
   bwts[0] = bwt_restore_bwt(forward_bwt_filename);