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Fixed docs 

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5920 348d0f76-0448-11de-a6fe-93d51630548a
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ebanks 2011-06-02 16:02:14 +00:00
parent 84c2c5d7e6
commit 3302a733ef
1 changed files with 1 additions and 1 deletions
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java/src/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedArgumentCollection.java
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@ -35,7 +35,7 @@ import java.io.File;
public class UnifiedArgumentCollection {
// control the various models to be used
@Argument(fullName = "genotype_likelihoods_model", shortName = "glm", doc = "Genotype likelihoods calculation model to employ -- BOTH is the default option, while INDEL is also available for calling indels and SNP is available for calling SNPs only", required = false)
@Argument(fullName = "genotype_likelihoods_model", shortName = "glm", doc = "Genotype likelihoods calculation model to employ -- SNP is the default option, while INDEL is also available for calling indels and BOTH is available for calling both together", required = false)
public GenotypeLikelihoodsCalculationModel.Model GLmodel = GenotypeLikelihoodsCalculationModel.Model.SNP;
@Argument(fullName = "p_nonref_model", shortName = "pnrm", doc = "Non-reference probability calculation model to employ -- EXACT is the default option, while GRID_SEARCH is also available.", required = false)