Big change to PSP2: Amplicon sequence no longer lower-cased for repetitiveness, but instead for non-uniqueness via alignment by bwa. Performance heavily dependent on length of sequence (duh), with size=30 a good balance, but default is 20 because that's the default length of a sequenom primer. Indentation changes to other stuff.

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Christopher Hartl 2011-07-12 18:33:12 -04:00

parent d6517adb42

commit 30768eccbb

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