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Updating md5s

This commit is contained in:
Eric Banks 2011-12-09 00:47:01 -05:00
parent 8777288a9f
commit 2fe50c64da
1 changed files with 3 additions and 4 deletions
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7
public/java/test/org/broadinstitute/sting/gatk/walkers/genotyper/UnifiedGenotyperIntegrationTest.java
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@ -7,7 +7,6 @@ import org.testng.annotations.Test;
import java.util.Arrays;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
// ********************************************************************************** //
@ -29,7 +28,7 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
public void testMultiSamplePilot1() {
WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec(
baseCommand + " -I " + validationDataLocation + "low_coverage_CEU.chr1.10k-11k.bam -o %s -L 1:10,022,000-10,025,000", 1,
Arrays.asList("b70732a2f63f8409b61e41fa53eaae3e"));
Arrays.asList("f6ef10dee80f9ccd7d245a28787ca887"));
executeTest("test MultiSample Pilot1", spec);
}
@ -295,8 +294,8 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
WalkerTest.WalkerTestSpec spec4 = new WalkerTest.WalkerTestSpec(
baseCommandIndelsb37 + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -alleles " + validationDataLocation + "ALL.wgs.union_v2_chr20_100_110K.20101123.indels.sites.vcf -I " + validationDataLocation +
"phase1_GBR_realigned.chr20.100K-110K.bam -o %s -L 20:100,000-110,000", 1,
Arrays.asList("9be28cb208d8b0314d2bc2696e2fd8d4"));
executeTest("test MultiSample 1000G Phase1 indels with complicated records emitting all sites", spec4);
Arrays.asList("6ee2f3c6b5422f0a2ad0669639e293cb"));
executeTest("test MultiSample Phase1 indels with complicated records", spec4);
}
@Test