From 2fd816ac5fb9df74c088e2b5008757eb232b11fa Mon Sep 17 00:00:00 2001 From: kshakir Date: Sun, 14 Nov 2010 06:33:28 +0000 Subject: [PATCH] Updated ordering of integration tests. GVC > VR > AVC git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4669 348d0f76-0448-11de-a6fe-93d51630548a --- .../VariantRecalibrationWalkersIntegrationTest.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/java/test/org/broadinstitute/sting/gatk/walkers/variantrecalibration/VariantRecalibrationWalkersIntegrationTest.java b/java/test/org/broadinstitute/sting/gatk/walkers/variantrecalibration/VariantRecalibrationWalkersIntegrationTest.java index 52f6958ee..30d44a77e 100755 --- a/java/test/org/broadinstitute/sting/gatk/walkers/variantrecalibration/VariantRecalibrationWalkersIntegrationTest.java +++ b/java/test/org/broadinstitute/sting/gatk/walkers/variantrecalibration/VariantRecalibrationWalkersIntegrationTest.java @@ -64,7 +64,7 @@ public class VariantRecalibrationWalkersIntegrationTest extends WalkerTest { executeTest("testGenerateVariantClusters-"+params.inVCF, spec).getFirst(); } - @Test(dataProvider = "VRTest", enabled = true) + @Test(dataProvider = "VRTest", dependsOnMethods = {"testGenerateVariantClusters"}, enabled = true) public void testVariantRecalibrator(VRTest params) { //System.out.printf("PARAMS FOR %s is %s%n", vcf, clusterFile); WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( @@ -85,7 +85,7 @@ public class VariantRecalibrationWalkersIntegrationTest extends WalkerTest { executeTest("testVariantRecalibrator-"+params.inVCF, spec).getFirst(); } - @Test(dataProvider = "VRTest", enabled = true) + @Test(dataProvider = "VRTest", dependsOnMethods = {"testVariantRecalibrator"}, enabled = true) public void testApplyVariantCuts(VRTest params) { WalkerTest.WalkerTestSpec spec = new WalkerTest.WalkerTestSpec( "-R " + b36KGReference +