Correct md5's for previous code change
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parent
972d6531b6
commit
2f86ccb086
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@ -327,13 +327,13 @@ public class UnifiedGenotyperIntegrationTest extends WalkerTest {
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public void testMultiSampleIndels() {
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WalkerTest.WalkerTestSpec spec1 = new WalkerTest.WalkerTestSpec(
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baseCommandIndels + " -I " + validationDataLocation + "low_coverage_CEU.chr1.10k-11k.bam -o %s -L 1:10450700-10551000", 1,
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Arrays.asList("9c9ff13dba0898e905ac9e23d30a24b6"));
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Arrays.asList("99e278baa2367b2bb016e2f37139d12f"));
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List<File> result = executeTest("test MultiSample Pilot1 CEU indels", spec1).getFirst();
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WalkerTest.WalkerTestSpec spec2 = new WalkerTest.WalkerTestSpec(
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baseCommandIndels + " --genotyping_mode GENOTYPE_GIVEN_ALLELES -alleles " + result.get(0).getAbsolutePath() + " -I " + validationDataLocation +
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"low_coverage_CEU.chr1.10k-11k.bam -o %s -L 1:10450700-10551000", 1,
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Arrays.asList("300e6274f8c1ce6a577eb06e5b56de90"));
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Arrays.asList("c43ac445130161b8250bfbdc6c67782a"));
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executeTest("test MultiSample Pilot1 CEU indels using GENOTYPE_GIVEN_ALLELES", spec2);
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}
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